The predmicror is a collection of predictive microbiology models commonly fitted to experimental data. This first version includes a set of most popular full, reduced an no lag growth models.
Installation
You can install the predmicror development version from GitHub: https://github.com/fsqanalytics/predmicror using the devtools package:
install.packages("devtools")
devtools::install_github("fsqanalytics/predmicror")Using predmicror
The easiest way to get started with predmicror is to work through the examples in the vignettes, where you can find information on:
- What your input data should look like
- How to fit a full growth curve
- How to fit a reduced growth curve
- How to fit a no lag growth curve
You can find the vignettes at the predmicror website https://github.com/fsqanalytics/fsqanalystics.github.io.
Reporting bugs
You can report bugs at: https://github.com/fsqanalytics/predmicror/issues